Seasonal soil viral metagenomics (Asteraceae)

Local Knowledge Graph (16 entities)

Knowledge graph centered on Seasonal soil viral metagenomics (Asteraceae) with 16 nodes and 30 connections. Top connected: Virus diversity and activity is driven by snowmelt, temporal dynamics, snowmelt infiltration, Illumina paired-end sequencing, viral operational taxonomic units.

Description

Systematic collection of soil samples across seasonal transitions in a mountainous watershed to capture viral community dynamics during snowmelt and plant phenological changes.

Typical Equipment

• 4-cm diameter soil bulk density corer
• dry ice
• -80°C freezer

Output Measurements

• soil samples across seasons
• depth profiles
• viral DNA and RNA

Papers Using This Protocol (1)