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Phylomatic phylogenetic analysis

Subcategory: phylogenetic analysis
Standard reference: Webb and Donoghue 2005
Papers: 1 | Mentions: 1

Local Knowledge Graph (10 entities)

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Knowledge graph centered on Phylomatic phylogenetic analysis with 10 nodes and 26 connections. Top connected: pollinator observation, floral visitation rate, ecosystem function, Bagged flower nectar accumulation, pollinator-mediated selection.

Description

Computational approach to estimate phylogenetic relationships and distances using the Phylomatic web service with standardized angiosperm phylogenies and fossil-calibrated branch lengths.

Typical Equipment

  • Phylomatic web service
  • Mesquite software ver. 2.75
  • Phylocom software

Output Measurements

  • mean phylogenetic distance
  • nearest neighbor distance
  • phylogenetic distance matrix

Papers Using This Protocol (1)

student_paper

Floral visitation determined by phylogenetic distance in the plant communities of Gothic, CO.

2014using