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Nested genetic variation simulation (Myrtaceae)

Subcategory: population genetics modeling
Papers: 1 | Mentions: 1

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Knowledge graph centered on Nested genetic variation simulation (Myrtaceae) with 12 nodes and 21 connections. Top connected: ecosystem function, heritability, Accounting for the nested nature of genetic variat, population structure, linear mixed effects model.

Description

Simulates trait data with hierarchical genetic structure where genotypes are nested within species, allowing comparison of nested vs non-nested statistical approaches. Uses allele matrices to generate additive genetic effects with environmental noise.

Typical Equipment

  • R 3.0.1 statistical programming language
  • MATLAB v8.4 programming language

Output Measurements

  • simulated trait values
  • genotype classifications
  • species classifications

Papers Using This Protocol (1)

article

Accounting for the nested nature of genetic variation across levels of organization improves our understanding of biodiversity and community ecology

2016Oikosintroducing