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Principal Component Analysis (Brassicaceae)
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Knowledge graph centered on Principal Component Analysis (Brassicaceae) with 41 nodes and 128 connections. Top connected: phenological mismatch, Young inversion with multiple linked QTLs under se, phenotypic plasticity, specific leaf area, local adaptation.
Description
Genomic sequencing and demographic modeling using GADMA2 to estimate historical gene flow patterns and migration rates between populations across elevational gradients.
Typical Equipment
- Illumina NextSeq 500 platform
- GADMA2 software
Output Measurements
- gene flow rates
- migration patterns
- demographic history
Papers Using This Protocol (7)
other
An uphill grind for wild plant populations
article
Adaptation and gene flow are insufficient to rescue a montane plant under climate change
article
Young inversion with multiple linked QTLs under selection in a hybrid zone
student_paper
Testing for the genetic basis of cold tolerance in a wild mustard
article
Microgeographic patterns of genetic divergence and adaptation across environmental gradients in <i>Boechera stricta</i>(Brassicaceae)
student_paper
Geographic variation in flowering phenology in Boechera stricta: testing for adaptive response to climate across the species range
article